DisGeNET - a database of gene-disease associations

List of shared variants

Malignant neoplasm of ovary, C1140680

Disease: Malignant neoplasm of breast

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs2304277	OGG1 ; CAMK1	0.776	0.280	3	9759396	non coding transcript exon variant	G/A	snv		0.26	8
rs1052133	OGG1 ; CAMK1	0.476	0.800	3	9757089	missense variant	C/G	snv	0.27	0.22	147
rs746702110	OGG1	0.627	0.480	3	9756778	missense variant	C/T	snv	1.2E-05	2.8E-05	38
rs200389141	BLM	0.776	0.320	15	90761015	stop gained	C/A;T	snv	4.1E-06; 1.4E-04	1.7E-04	11
rs587776650	NBN	0.790	0.280	8	89971214	frameshift variant	GTTTT/-	delins		2.0E-04	11
rs2032582	ABCB1	0.538	0.800	7	87531302	missense variant	A/C;T	snv	0.54; 3.8E-02		97
rs1046428	GSTZ1	0.776	0.200	14	77327940	missense variant	T/A;C	snv	4.0E-06; 0.81		8
rs3177427	GSTZ1	0.827	0.160	14	77326864	stop gained	G/A;C;T	snv			5
rs1042522	TP53	0.426	0.800	17	7676154	missense variant	G/C;T	snv	0.67		242
rs1131691014	TP53	0.439	0.800	17	7676154	frameshift variant	-/C	ins			214
rs878854066	TP53	0.439	0.800	17	7676153	missense variant	GG/AC	mnv			213
rs121913343	TP53	0.611	0.520	17	7673803	missense variant	G/A;C;T	snv	1.2E-05		44
rs1048943	CYP1A1	0.533	0.720	15	74720644	missense variant	T/A;C;G	snv	0.11	5.9E-02	88
rs56307747	ELN ; ELN-AS1	0.776	0.160	7	74059952	missense variant	G/A;C	snv	4.0E-06		8
rs764918809	MDM2	0.827	0.160	12	68839337	missense variant	T/C	snv	4.0E-06		6
rs61755649	RAD51B	0.882	0.160	14	67885891	missense variant	C/T	snv	6.8E-05	4.9E-05	3
rs1695	GSTP1	0.457	0.880	11	67585218	missense variant	A/G	snv	0.34	0.36	188
rs2240308	AXIN2	0.701	0.360	17	65558473	missense variant	G/A	snv	0.47	0.39	18
rs1271572	ESR2	0.708	0.400	14	64295199	intron variant	A/C;T	snv			16
rs137852986	BRIP1	0.732	0.440	17	61716051	stop gained	G/A	snv	1.7E-04	1.5E-04	13
rs63750695	PMS2	0.851	0.280	7	5978675	frameshift variant	AAGTT/-	delins			6
rs587782818	RAD51C	0.790	0.160	17	58703325	stop gained	C/G	snv	6.4E-05; 4.0E-06	1.4E-05	8
rs2273535	AURKA	0.645	0.360	20	56386485	missense variant	A/C;T	snv	0.28		38
rs4759314	HOTAIR	0.649	0.440	12	53968051	non coding transcript exon variant	G/A	snv		0.93	31
rs1899663	HOTAIR	0.683	0.280	12	53967210	intron variant	C/A	snv		0.28	22